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How can I plot contour or heat-map graph over the region from NetCDF files?

You can using Netcdf Extractor V2.1 for plotting contour or heat-map graph. In Netcdf Extractor, you can extract data in region(multiple lat grids and multiple lon grids) and plot contour or heatmap graphs for this region data. Netcdf Extractor can extract any netcdf file and merge many netcdf files.